Gallery#
Below you will find different ways you might choose to analyze the PTMs identified by PTM-POSE:
General Overview of Spliced PTMs#
Inspecting number of PTMs with annotation information available
Inspecting number of PTMs with annotation information available
Functional Impact of Spliced PTMs#
Identifying available PTM-specific annotation information
Identifying available PTM-specific annotation information
Identify enriched gene sets associated with differentially spliced PTMs
Identify enriched gene sets associated with differentially spliced PTMs
Impact on protein interaction and regulatory networks#
Identify kinases with enriched substrates in differentially included exons, using an adapted version of KSTAR
Analyzing altered flanking sequences#
Inspect difference of flanking sequence due to splice event
Inspect difference of flanking sequence due to splice event
Probing where and how PTM flanking sequences are altered
Probing where and how PTM flanking sequences are altered
Kinase affinity due to PTM flanking sequence alterations
Kinase affinity due to PTM flanking sequence alterations