ProteomeScoutAPI

Overview

• Getting Started
  • About
  • Overview
  • Installation
    • Pip
    • Tarball
    • Git
  • Configuration
  • Contributing code
• Dependencies
• API Reference
  • The “Config” Module
    • update_configuration()
  • Interfacing with the API
    • The “ProteomeScoutAPI” Class
    • The “ProteomicDataset” Class

Examples

• Annotate phosphoproteomic dataset
  • Load dataset
• Look at overlap with ProteomeScout Dataset
  • Get list of all proteins and check they have a record in ProteomeScout database file
  • For proteins, get phosphorylation sites and look at overlap
  • Create a report

Indices and tables

• Index

• Module Index

• Search Page