Analysis Examples ================= Activation of Kinases in Controlled Cell Lines ---------------------------------------------- .. toctree:: :maxdepth: 2 EGF_184A1_WolfYadlin2007.ipynb .. toctree:: :maxdepth: 2 EGF_HER2_WolfYadlin2006.ipynb .. toctree:: :maxdepth: 2 TCR_Analysis.ipynb Inhibition of Kinases in Controlled Cell Lines ---------------------------------------------- .. toctree:: :maxdepth: 2 BCR-ABL_Analysis.ipynb .. toctree:: :maxdepth: 2 AKT_Inhib_Analysis.ipynb .. toctree:: :maxdepth: 2 Vemurafenib_Analysis.ipynb Profiling HER2 therapy response in Breast Cancer ------------------------------------------------ .. toctree:: :maxdepth: 2 CPTAC_Analysis.ipynb .. toctree:: :maxdepth: 2 PDX_Analysis.ipynb .. toctree:: :maxdepth: 2 Microbiopsy_Analysis.ipynb